SE2510851

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2081
  • Brachypodium distachyon
  • SE2510851
  • Tc1/Mariner
  • St40
  • Bd5:24185938-24186033
  • TA
  • TACTCCCTCCGATCCATAATAAATGTCGTGGATTTAGTACAACTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
      C           A   A    G           CA     AG
TACTCC TCCGATCCATA TAA TGTC TGGATTTAGTA  ACTTT  
|||||| ||||||||||| ||| |||| |||||||||||  |||||  T
ATGAGG AGGCTAGGTAT ATT ACAG ACCTAAATCAT  TGAAA  
      T           -   C    A           AC     CA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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