Plant MITE

SE2510897

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2127
Brachypodium distachyon
SE2510897
Tc1/Mariner
St23
Bd1:5535656-5535752
TA
TACTCCCTCCGATCCATAATAGGTGTCTCAGA

Secondary structure and sequence

TSD TIR

5'

3'

              C                 CTTAGTACAAC         A
TACTCCCTCCGATC ATAATAGGTGTCTCAGA           TTTGTACTA 
|||||||||||||| |||||||||||||||||           ||||||||| C
ATGAGGGAGGCTAG TATTATTCACAGAGTCT           AAACATGAT 
              A                 ----------A         T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510897

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510897