SE2510904

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2134
  • Brachypodium distachyon
  • SE2510904
  • Tc1/Mariner
  • St10
  • Bd4:23534441-23534557
  • TA
  • TACTCCCTCCGTCCCATATTAAGTGACTTTCTATTACATGTATCTAGACGCT

Secondary structure and sequence

TSD    TIR
5'



3' 
             C               --------  TAT  --C         G  G  TT
TACTCCCTCCGTC CATATTAAGTGACTT        TC   TA   ATGTATCTA AC CT  
||||||||||||| |||||||||||||||        ||   ||   ||||||||| || ||   
ATGAGGGAGGCAG GTATAATTCACTGAG        AG   AT   TACATAGAT TG GA  
             A               TTTAAACT  TTT  ACC         A  -  TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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