SE2510973

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2203
  • Brachypodium distachyon
  • SE2510973
  • Tc1/Mariner
  • St10
  • Bd2:39135423-39135537
  • N.A.
  • CTCCCTCCTATCCATATTACTTGTCGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA        T                -G    ATTAC   TATATAGACGCTTTTTAA
  CTCCCTCC ATCCATATTACTTGTC  AAAT     ATG                  
  |||||||| ||||||||||||||||  ||||     |||                  A
  GAGGGAGG TGGGTATAATGAACAG  TTTA     GGT                  
          C                AG    -AACG   TTATACCTACATAGATGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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