Plant MITE

SE2511019

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2249
Brachypodium distachyon
SE2511019
Tc1/Mariner
St23
Bd1:66785494-66785590
TA
TACTCCCTCCGATCCATAATAAGTGTCTCATATTTTGTACTAACTTAGTACAAAGT

Secondary structure and sequence

TSD TIR

5'

3'

                              ----------T           A
TACTCCCTCCGATCCATAATAAGTGTCTCA           ATTTTGTACTA 
||||||||||||||||||||||||||||||           ||||||||||| C
ATGAGGGAGGCTAGGTATTATTCACAGAGT           TGAAACATGAT 
                              CTGAATCACGT           T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2511019

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2511019