Plant MITE

SE2511053

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2283
Brachypodium distachyon
SE2511053
Tc1/Mariner
St16
Bd1:45831924-45832051
TA
TACTCCCTCCGTCCAACAAAGGATGTCTCAACTTTGACTAAATTTGAATGCATCTATACA

Secondary structure and sequence

TSD TIR

5'

3'

                               C    A T       A   C     T   CTAA
TACTCCCTCCGTCCAACAAAGGATGTCTCAA TTTG C AAATTTG ATG ATCTA ACA    
||||||||||||||||||||||||||||||| |||| | ||||||| ||| ||||| |||     
ATGAGGGAGGCAGGTTGTTTTCTACAGAGTT AAAC G TTTAAAT TAC TAGAT TGT    
                               C    A T       C   A     C   ACTG

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2511053

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2511053