SE2511069

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2299
  • Brachypodium distachyon
  • SE2511069
  • Tc1/Mariner
  • St10
  • Bd1:8794411-8794621
  • TA
  • TACTCCCTCCGATCCATAATAAGTGTCTCAAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
      C                          CTATCAC     TGTACTAAGTTAGTACTCCCTGCGTTCCATAATTCTTGTCGAAATATTACATGTATCTAGAC
TACTCC TCCGATCCATAATAAGTGTCTCAAGT       AACTT                                                              
|||||| ||||||||||||||||||||||||||       |||||                                                              G
ATGAGG AGGCTAGGTATTATTCACAGAGTTTA       CATGA                                                              
      A                          ----AAA     GGGTGGCAAAGTATTAAGAACAGAGTTTAAACTGGTTTTACCTACATAGATAAGGATTTTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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