Plant MITE

SE2511081

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2311
Brachypodium distachyon
SE2511081
Tc1/Mariner
St21
Bd5:20021002-20021111
TA
TACTCCCTCCGATCCTAAATTCTTGTCGTTGTTTTAGTGCAAATTT

Secondary structure and sequence

TSD TIR

5'

3'

                                              GCACTAAAA
TACTCCCTCCGATCCTAAATTCTTGTCGTTGTTTTAGTGCAAATTT         
||||||||||||||||||||||||||||||||||||||||||||||          
ATGAGGGAGGCTAGGATTTAAGAACAGCAACAAAATCACGTTTAAG         
                                              AACAGCAAC

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2511081

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2511081