SE2511094

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2324
  • Brachypodium distachyon
  • SE2511094
  • Tc1/Mariner
  • St66
  • Bd4:39042152-39042290
  • TA
  • TACTCCCTCCGATCCAAATTAATTGTCGCAGCTTTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                              G    A  CAGATTTG      -    GCATGTATCTAGACGCGT
TACTCCCTCCGATCCAAATTAATTGTCGCA CTTT GT        GTTTAG ATAC                  
|||||||||||||||||||||||||||||| |||| ||        |||||| ||||                   
ATGAGGGAGGCTAGGTTTAATTAACGGCGT GAAA CA        AAAGTT TACT                  
                              -    -  --------      T    CTCTTGGATGTGTGACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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