SE2511101

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2331
  • Brachypodium distachyon
  • SE2511101
  • Tc1/Mariner
  • St10
  • Bd1:56474650-56474766
  • TA
  • TACTCCCTCCGTCCCATATTAAGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
                          CACAAA     CCAA     AATA        T TAAA
TACTCCCTCCGTCCCATATTAAGTGA      TTTTT    ATATG    TATCTATG C    
||||||||||||||||||||||||||      |||||    |||||    |||||||| |     
ATGAGGGAGGCAGGGTATAATTTACT      AAAAA    TGTAC    ATAGATAT G    
                          ------     ATAA     ----        - CAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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