Plant MITE

SE2511106

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2336
Brachypodium distachyon
SE2511106
Tc1/Mariner
St51
Bd3:6924981-6925042
TA
TACTCCCTCCGATCCTAAATTCTTGTCATG

Secondary structure and sequence

TSD TIR

5'

3'

                     CT  TCA  GT
TACTCCCTCCGATCCTAAATT  TG   TG  
|||||||||||||||||||||  ||   ||   
ATGAGGGAGGCTAGGATTTAA  AC   AT  
                     --  TTG  TT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2511106

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2511106