SE2521133

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2363
  • Brachypodium distachyon
  • SE2521133
  • Mutator
  • M30
  • Bd4:34302679-34302809
  • GGTTTGATT
  • GTTTGATTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
G   T       GAGA        A   C      A       CACA          T      C
 GTT GATTGGA    GATCTCCT ACT AAAGTC GTGACTT    GTCACTGACA GTGGAC 
 ||| |||||||    |||||||| ||| |||||| |||||||    |||||||||| |||||| C
 TAG TTGGCCT    CTAGAGGA TGA TTTTAG CACTGAA    CAGTGACTGT CACCTG 
T   T       GAAC        C   A      C       ATAC          C      G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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