SE0450123

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2493
  • Brassica rapa
  • SE0450123
  • PIF/harbinger
  • To26
  • A09:11842970-11843247
  • TAA
  • AGAGCACCAGCATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA              -------A         CGGTTGGGGTTCATAATTTGAATTTCTTATTATTTTTTTTATTTTTCGTTTGATTTAAAAAAAATAAATAAATAAATAAATTGACCAATAGCGGACTGCTACGTGGCGT
  AGAGCACCAGCATT        ATGAACCCC                                                                                                             
  ||||||||||||||        |||||||||                                                                                                             G
  TCTCGTGGTCGTAA        CACTCACCT                                                                                                             
AA              CTGCCAAA         CAAGTGTGCGAAGAGGTCTTTTTTGTTTATAATATTATACGATGTCATTACTGGGACAGAGCGGTGCGAGGAAGGCGTACTTGGGCCTAGCAGTGACAAGTCGCTTGGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3