SE0450147

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2517
  • Brassica rapa
  • SE0450147
  • PIF/harbinger
  • To30
  • A02:24197538-24197798
  • TAA
  • AGAGCATCTTTAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   G            TAAATGCATTTTAACATTTTAAAGTTTCTTAGTTTTTGACTTTTTTTCTAAAAAAAAAAAAAAAAAAAAAAATTATAACTCAATCCAATTGCGGGCCACCACGTGTTGGTGG
  AGA CATCTTTAACGC                                                                                                                
  ||| ||||||||||||                                                                                                                G
  TCT GTAGAAATTGGG                                                                                                                
AA   G            TCCAATATTCACCCAAAGAATTAGAACCCCATGGTGTTTTTGTTGTTTTTAGCTATCGTCTTCACTACTTAATTCCTAGCCATTACCCGACAAAAGACGTGACAAACACCCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3