SE0420241

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2611
  • Brassica rapa
  • SE0420241
  • Mutator
  • M5
  • A06:8096344-8096512
  • AAATATATG
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
     AA     TGGGCTTATTTGCCAAATAACCAAAAAAAAATGAAAAATTAGATTTTGGGAGAGAGAGTAGAGAGAGATAGGAAG
       ATATA                                                                           
       |||||                                                                            
       ATCCC                                                                           
TATATAA     TTTAACGTGGGATATATGTACTTTTTTTTTGTTTATGTGATTTATTGGTTTTAGGGAGGGAGAGAGGATGAAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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