SE0420264

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2634
  • Brassica rapa
  • SE0420264
  • Mutator
  • M7
  • A09:26979954-26980121
  • ATCTGAAAA
  • AAGGGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                                                        ATCTGAA         TTGACCCTATAACCAAAAAAAAAACTATATTT
                                                                               AAGGGAAAT                                
                                                                               |||||||||                                 
                                                                               TTCCCTTTA                                
AAAAGTCTACCCAATTAAACGATCTACTGATATTACCTTTTTTATAATCAAAACATCATTCTTCCATCTCTCTCTATCC         CTTCTCTCTCTCATAATATACCAATCTACTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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