SE0420301

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2671
  • Brassica rapa
  • SE0420301
  • Mutator
  • M9
  • Scaffold000123:154490-154651
  • TTATTAATA
  • TATTAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
T        --   AATTTGTACTCCCTACACACAACATATACCCTATTTGCACTCCATACCCTATTTCCCCCTAATTTTCT
 TATTAATA  GAG                                                                    
 ||||||||  |||                                                                    T
 ATAATTAT  TCA                                                                    
         TC   TTTAATCGAGTTAAATGATTTTCTTCACCCTATGGTATCTTAACTCCCTTTTACCACTACTACCCCCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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