SE4260013

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2781
  • Cajanus cajan
  • SE4260013
  • Micron
  • Mim2
  • Scaffold130390:228614-228802
  • TATATAT
  • TATATATATATATATAAGGAGCATATCAAGTGAGAGAAAATTTATTATGAGAGATGAGAGAGTTAAAATATAATCTTTAAATTAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                 A                                           A                  A      CAAGTG
 TATATATATATATATA GGAGCATATCAAGTGAGAGAAAATTTATTATGAGAGATGAGAG GTTAAAATATAATCTTTA ATTAAT      
 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||      A
 ATATATATATATATAT CCTCGTATAGTTCACTCTCTTTTAAATAATACTCTCTACTCTC CAATTTTATATTGGGAAT TAATTA      
T                C                                           C                  C      AAAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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