SE4250047

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2815
  • Cajanus cajan
  • SE4250047
  • PIF/harbinger
  • To15
  • Scaffold136490:455350-455493
  • TAA
  • AGTGCGTGTTTGCTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA    C             -ATTTAG      GATTTTTCACTCTCTCTCCACGTTTACAAGCCAATTTAC
  AGTG GTGTTTGCTTTAG       AAACGT                                       
  |||| |||||||||||||       ||||||                                       G
  TCAC CACAAACGAAATC       TGCACT                                       
AA    A             GAAAACC      TTTAAGTGCAAACACTCTTCGTTTTTTAACATTGAAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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