SE4250048

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2816
  • Cajanus cajan
  • SE4250048
  • PIF/harbinger
  • To16
  • Scaffold127746:164750-164884
  • TTA
  • AGTGCTTGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    CT      ATACT    -----    GATCTATGTTTTCTAACATTTTTATGTCATAACGCACTA
  AGTG  TGTTTG     GTGT     TTGT                                       
  ||||  ||||||     ||||     ||||                                        
  TCAC  ACAAAC     AGTG     CAGA                                       
AT    AC      --GAA    AAACA    TGAATCTGCACTAAACCTCTTTATTGATAATCAACGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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