SE4220058

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2826
  • Cajanus cajan
  • SE4220058
  • Mutator
  • M1
  • Scaffold132067:516-715
  • AATAAAATT
  • ATTGAGTTAATCACCTATACACTGTCAGTATAAATTTTTTTACACTGACAGTCAATCAGAACCGTTAATAGTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AATAAA                             A    -          C               AC          A   GTTCATCTGCTCATTTA
      ATTGAGTTAATCACCTATACACTGTCAGT TAAA TTTTTTTACA TGACAGTCAATCAGA  CGTTAATAGT TTT                 
      ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||  |||||||||| |||                 A
      TAACTCAATTAGTGGATATGTGACGGTCA ATTT AAAAAAATGT ATTGTCAGTTAGTCT  GCAATTATTA AGA                 
TTAAAA                             C    C          A               CA          C   AAAAATAAAATTAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3