SE4250063

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2831
  • Cajanus cajan
  • SE4250063
  • PIF/harbinger
  • To21
  • Scaffold128360:171996-172139
  • TTA
  • AGTGTGTGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT  T          TTTAT    T   ATTCATTCAACGGACTTTTACACATTCCAATACATCAAACGGAAA
  AG GTGTGTTTGG     CGTT GAA                                             
  || ||||||||||     |||| |||                                              
  TC CACACAAACC     TTCA ATG                                             
AT  C          -CTTT    -   CAAGTTGCATTGAACGAAAATTAGTTTACCCTGTTTTCTCAATGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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