SE4250073

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2841
  • Cajanus cajan
  • SE4250073
  • PIF/harbinger
  • To9
  • CcLG01:14013934-14014057
  • TTA
  • GCCTGTGTTTGGTTTCACGTTTGAAACGTGAAAAATCACGTTTTACGTGAAGCTACACATTGTAGCTTCCACGTTAAACGTGATTTTTCACGTTTCAAACGTGAAACCAAACACGC

Secondary structure and sequence

TSD    TIR
5'



3' 
  TTA  CT                                       T     -        C
     GC  GTGTTTGGTTTCACGTTTGAAACGTGAAAAATCACGTTT ACGTG AAGCTACA 
     ||  ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| A
     CG  CACAAACCAAAGTGCAAACTTTGCACTTTTTAGTGCAAA TGCAC TTCGATGT 
ATTCA  --                                       T     C        T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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