SE4250074

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2842
  • Cajanus cajan
  • SE4250074
  • PIF/harbinger
  • To19
  • CcLG02:26975265-26975408
  • TAC
  • GTGCATGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3'
TAC            ---------      ACGCAAACGTGAATTTTCACGTTTAGTTGAAGCAAAAAAATTTTGC
   GTGCATGTTTGG         GTTTCA                                              
   ||||||||||||         ||||||                                              T
   CACGTACAAACC         ATTTTG                                              
CAT            TAACCTAAA      AACTAAAATGTAAGAGAGAAGTGCAACTTCTACCTAAAATGCACCT

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End