SE4250075

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2843
  • Cajanus cajan
  • SE4250075
  • PIF/harbinger
  • To15
  • CcLG03:19976309-19976452
  • TAA
  • AGTGCGTGTTTGCTTTAGATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 GA   AGAA      TTT     ----TCTCTC   ACGTTTACAAGCCAATTTA
  AGTGCGTGTTTGCTTTA  TTT    ACGTGA   TTCAC          TCT                   
  |||||||||||||||||  |||    ||||||   |||||          |||                   C
  TCACGCACAAACGAAAT  AAA    TGTACT   AAGTG          TCG                   
AA                 GG   -ACC      TTT     CAAACACTCT   TTTTTTAACATCGAAGATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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