SE4250085

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2853
  • Cajanus cajan
  • SE4250085
  • PIF/harbinger
  • To27
  • CcLG09:3981549-3981693
  • GTA
  • GTGTGTTTGGATTCGCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTAGC          A       ATTG   TATGTTT   AAC     C    CAATTT   G          A
     GTGTGTTTGG TTCGCGT    AGT       TCG   AGAAG ACGT      GAT AGAAGCAAGT 
     |||||||||| |||||||    |||       |||   ||||| ||||      ||| |||||||||| A
     CACACAAACC AGGTGCA    TCG       AGC   TTTTT TGCA      TTA TCTTCGTTTA 
ATGGA          A       GTTG   TAGACTT   GCA     -    ---CTT   G          T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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