SE4250093

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2861
  • Cajanus cajan
  • SE4250093
  • PIF/harbinger
  • To28
  • CcLG06:20013230-20013363
  • ATA
  • TAGTGTGTTTGGTTGCACGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATA            TT  A    TTTTATGCGGTTTT       T     ----      -AAT   TA
   TAGTGTGTTTGG  GC CGTT              TCACGTT ATTCA    GAAGCG    AGT  
   ||||||||||||  || ||||              ||||||| |||||    ||||||    |||   
   ATCGTACAAACC  TG GCAA              AGTGCAG TAAGT    TTTTGC    TCA  
ATA            TT  C    -TCTTTCATTTTTT       T     AGGA      ACCT   TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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