SE4220095

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2863
  • Cajanus cajan
  • SE4220095
  • Mutator
  • M16
  • CcLG06:11978026-11978389
  • TTCTTTTTT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCTTTTTTGATT     -A    TTTAGTCCCTCAAATTTAAAATTGTTGTTTTCTGTCCCTGTAATTTTTAAAAATCTTATTTTAGTTCTTTAGATCACCAATAACATATTTGAAAGTGACTAATTAAGACAGTTATGTAATATCGACCGGATTTAATGTGATATTTTCACTGATAGGGACACT
             TAAAT  TGTT                                                                                                                                                                  
             |||||  ||||                                                                                                                                                                   
             CTTCC  ATTT                                                                                                                                                                  
       TTTTTT     GA    ATACAAAAATCAGGGAGTTTAAATCTCATTTAGACAAAAACCAGGGAGTTTAAATTTTAACAATAAAAATCAGGGATATTAAAGTTTTTTAGAATAAAATCAGGAATATAAGTTTCAAATAATTCTTTAAATAGTTTGTAATAACGTATTTTATAAGGATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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