SE4250108

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2876
  • Cajanus cajan
  • SE4250108
  • PIF/harbinger
  • To31
  • CcLG07:1363148-1363290
  • TAA
  • GTGTGTTTGGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAGT         -   T AATT   -    GTAAGTTTATACTCTCTTCACGTCCATATATGCATTTACAAA
     GTGTGTTTG GTT G    TAT AAAC                                          
     ||||||||| ||| |    ||| ||||                                          G
     CGCACAAAC CAA C    GCA GGTT                                          
AATAT         T   T ----   A    GCACTTTTTAGTGCAAAGTAGTCTTCCTTTTTTAAAGTTGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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