SE4250116

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2884
  • Cajanus cajan
  • SE4250116
  • PIF/harbinger
  • To20
  • CcLG07:4501346-4501479
  • AAA
  • GTGCATGTTTGGTTACA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAA   CA         A  -CACCC       A TTCAGAACAAAAATCACGTTTAAAACGTAAAAG
   GTG  TGTTTGGTT CA      TAAACGT A                                 
   |||  ||||||||| ||      ||||||| |                                 T
   CAC  ACAAACCAA GT      ATTGCAT T                                 
AAA   AC         -  CTAAAA       - ATTTAATGCAATCTTACTTTCGACAATTAATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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