SE4250120

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2888
  • Cajanus cajan
  • SE4250120
  • PIF/harbinger
  • To32
  • CcLG03:25974172-25974305
  • TTA
  • GCCTGTTTGCTTTTACGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATA  C      C TT        AAAACTTGGACGTGATTTTG       - -- - ATTAGTTGCTTTTGCTG
     GC TGTTTG T  TACGTTTG                    AGAAGCA A  C T                 
     || |||||| |  ||||||||                    ||||||| |  | |                  
     CG ACAAAC A  ATGCAAAC                    GGTGCAA A  G A                 
ATTCA  C      C TT        ----------------CCTA       A GG G TAAAAGTGCAATATTGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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