SE4250129

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2897
  • Cajanus cajan
  • SE4250129
  • PIF/harbinger
  • To7
  • CcLG08:6952302-6952446
  • TAA
  • AGTGTGTGTTTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA G           TTTTCATTTT  A -  TAATTCTTTCGTCTCTCTCCACGTTTACATACGGATTTACGTAGAA
  A TGTGTGTTTGC          GA A CG                                              
  | |||||||||||          || | ||                                               
  T GCACACAAACG          AG G GC                                              
AA G           ---------T  - C  AAAATTGCACCAAAAAGTGCAAGTTGAACTTCGTTACTTATCGACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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