SE4250143

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2911
  • Cajanus cajan
  • SE4250143
  • PIF/harbinger
  • To40
  • Scaffold133818:5586-5709
  • TCT
  • GGGTGTGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TCT      --     AATAC     -CACACAC      A   ACTCAAACGAAAAATATGAGTG
   GGGTGT  GTTTG     TTATC        ATTCTC TAC                      
   ||||||  |||||     |||||        |||||| |||                      T
   CTCACG  CAAAC     AATAG        TTCAAT TTG                      
  T      TA     ---AA     TAAATTTT      -   CATGCAAGTTGAGTTAGGTAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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