SE4250148

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2916
  • Cajanus cajan
  • SE4250148
  • PIF/harbinger
  • To41
  • CcLG11:33895010-33895154
  • TTA
  • GCGTGTGTTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
  TTA      ---GT          TTTTGGAAAGCAATTTTTTTTTCTCTCTCCACGTCCAACAATGAATTTA
     GCGTGT     TTGGATTTCA                                                 
     ||||||     ||||||||||                                                  
     CGCACA     AACCTAAGAT                                                 
ATTCA      AACAT          TTGAATCTAAAAGTGCAAACTCATTTTCCTTGTTTATTATCAAAGTCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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