SE4250159

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2927
  • Cajanus cajan
  • SE4250159
  • PIF/harbinger
  • To14
  • CcLG08:12144374-12144507
  • TAA
  • GGGTGTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAA  -        GTTTTTT     ---   TGAACGTAACCCAAAAGCAACACATGAGTTGCTTTAGCTTT
   GG GTGTGTTT       GGTTA   CGT                                         
   || ||||||||       |||||   |||                                          
   TC CACACAAA       CCTTT   CAC                                         
 AA  A        -------     AGG   TTTTTGATGAATTTGCTTTAAAAAAGTGAAAGGCTATGTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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