SE4250170

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2938
  • Cajanus cajan
  • SE4250170
  • PIF/harbinger
  • To20
  • Scaffold132882:221867-222000
  • TAA
  • AGTGTGTGTTTGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               CAG     C  -     TAAATCACGTTAGAATGGACGCTATTAGCTATAAC
  AGTGTGTGTTTGGTT   ATTTT AA CGTGA                                   
  |||||||||||||||   ||||| || |||||                                    
  TCACGTACAAACCAA   GTGCA GG TTTGT                                   
AA               --T     -  T     ACTAAGTCTCGTTTTTAGTGCAAATTTTGCATTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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