SE0550013

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2978
  • Capsella rubella
  • SE0550013
  • PIF/harbinger
  • To6
  • scaffold_7:7083342-7083459
  • TAA
  • AGGGCATCCTCAATGGTAGCTTCTTAGGGCTAAGATTTCCTTAAGAGAGTACCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   G    C                                           C  AT
  AGG CATC TCAATGGTAGCTTCTTAGGGCTAAGATTTCCTTAAGAGAGTAC TT  
  ||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||   
  TCT GTAG AGTTACCATCGGAGAATCCCGATTCTAAAGGAATTCTCTCATG AA  
AA   G    T                                           T  TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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