SE0550051

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3016
  • Capsella rubella
  • SE0550051
  • PIF/harbinger
  • To18
  • scaffold_7:9520557-9520696
  • TTA
  • AGACCAACATTATTGCAAGCATCTTAAAACTGAAAATGGGGATCTTAGCACAGTGTTCTGTATCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT  AC               C                                              AT
  AG  CAACATTATTGCAAG ATCTTAAAACTGAAAATGGGGATCTTAGCACAGTGTTCTGTATCTT  
  ||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   
  TC  GTTGTAATAACGTTC TAGAATTTTGACTTTTACCCCTAGAATCGTGTCACAAGACATAGAA  
AT  CC               A                                              TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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