SE0550123

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3088
  • Capsella rubella
  • SE0550123
  • PIF/harbinger
  • To9
  • scaffold_7:45589-45706
  • TTA
  • AGACCATCCTCATTGGAGGGTTCTTATAAGTAAGATTTATCAAAAATGGTATGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT  AC                        A               AAT     G  AT
  AG  CATCCTCATTGGAGGGTTCTTATA GTAAGATTTATCAAA   GGTAT TT  
  ||  |||||||||||||||||||||||| |||||||||||||||   ||||| ||   
  TC  GTAGGAGTAACCTCCCAAGAATAT CATTCTAAATAGTTT   CCATA AA  
AT  CC                        C               CTC     G  TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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