SE4520038

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3126
  • Cannabis sativa
  • SE4520038
  • Mutator
  • M13
  • scaffold61183:2901-3101
  • ATTATTAAA
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
                    ATTATTAAA      ----      TAGGTATCAGTAGTACTCGATACCTTTAATAGTTGGTGCTCCACAATTGGTTAGCGATATTCTTTAA
                             GAGCAT    TGATAT                                                                   
                             ||||||    ||||||                                                                   A
                             TAACCA    TCGTGG                                                                   
AAATTATTACTCTTAACGATTTACCATAA      CAGA      GAAAAGCCACGGTATGATAATAACCACATTAATTCATAGCCTAGAGTATATTTAATTCTTTTATCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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