SE4520044

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3132
  • Cannabis sativa
  • SE4520044
  • Mutator
  • M17
  • scaffold81856:10392-10660
  • TAAAATCTA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
       TAAAATCT    ATA   - GAAAACTACCCTTTTTTATTACACATTAACCAAATATAGCTCTGAAATAATTTTAATTGATAAATACCCTCTTTTATAATCAAAGTACCAAATATAACCTCACAAAACTTATC
               AGGG   AGT T                                                                                                                 
               ||||   ||| |                                                                                                                  
               TAAT   GTG G                                                                                                                 
ATCTAAAATCTCCTT    ---   A ATATGGGTGAAAAACAAAATATAAAATTAAAAATGGAAGTAAAATGATAAGAAATTAAATATGGGTGAAAATATTCAATATAAGGGTAATACACGTAATCTTTCAGATTAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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