SE4520046

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3134
  • Cannabis sativa
  • SE4520046
  • Mutator
  • M13
  • scaffold15280:55746-55946
  • ATTTTTATT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
    ATTTT      - CAT        GACACTAGTGGTACCCAACATCTTTTATATGTGGCACTCTATGATTGATTATCAATATTCTTTAAAAGTTATTTTC
         TATTGA G   TGCTATTG                                                                            
         |||||| |   ||||||||                                                                            T
         CTCTTA C   GATTTTTA                                                                            
TTATTTTTA      A ---        ATGATAACTAGAAATCGTAAGAGAAGTCACAGTATGACAATAATCACATTAATTCATAACTCAGAATATATTGAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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