SE4520097

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3185
  • Cannabis sativa
  • SE4520097
  • Mutator
  • M6
  • scaffold21088:26203-26423
  • TTTTTATTT
  • G

Secondary structure and sequence

TSD    TIR
5'



3'
   TTTTTATTTA   AATTATCCCATATACTATTTTTTTATTTTTTATTTTTCAAATTTACGGTTTGAATTTTTAAAGTGGTTGCAATAGGGTTTTTATACGATTTTTTGT
             GGA                                                                                                
             |||                                                                                                 
             AAA                                                                                                
TTTATTTTTTCTC   AAAGTCAAAATGTGAAGTTTTGTCAAAAAAAAAACGTAAAAATGTTTTAACATATATTTTTGGGAATAACGTTGAACGCGACGTTGGATTTAACGA

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End