SE4350011

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3302
  • Linum usitatissimum
  • SE4350011
  • PIF/harbinger
  • To3
  • scaffold140:1200140-1200400
  • AGA
  • GGTAAGGTTTGACATCTAGAATTATGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AGA           A   C               TGAGAATAGTTGAAGAAAGTTGAGTTGAGGCTGGAAGAGGTTCTTGGAAGGAGGTTGAATAGACTGATATAAGAGATTCCAAGTGAAATTTTGTTT
   GGTAAGGTTTG CAT TAGAATTATGTTTTC                                                                                                
   ||||||||||| ||| |||||||||||||||                                                                                                C
   CCATTCCAAAC GTA ATCTTAGTACAACTT                                                                                                
AGA           C   A               TCAAATCAACTCCAACTCTCTCCATCACCTACCTTTCAACTGAATTCCTTATTTTTCCTAAGGATACTTTCAAATTAAAGGTGAACTCATCAAACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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