SE2710046

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3379
  • Setaria italica
  • SE2710046
  • Tc1/Mariner
  • St3
  • scaffold_1:42032048-42032198
  • TA
  • TACTCCCTCCGTTCCAAATTGTAGGTCGTTTTAGCTTTTTTAGGTTCGTAGATATTATTATGCATCTAGATATAGTGTATGTCTAGGTGCATAATAATATGTATGAACCTAGAAAAGTCAAAATGACCTACAATTTGGAACGGAGGGAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                A                 G                       G
TACTCCCTCCGTTCCAAATTGTAGGTCGTTTT GCTTTTTTAGGTTCGTA ATATTATTATGCATCTAGATATA 
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| T
ATGAGGGAGGCAAGGTTTAACATCCAGTAAAA TGAAAAGATCCAAGTAT TATAATAATACGTGGATCTGTAT 
                                C                 G                       G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3