Plant MITE

SE2750054

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_3387
Setaria italica
SE2750054
PIF/harbinger
To11
scaffold_9:55149845-55149969
AAT
TGGGCCTGTTCGCTTCAGCTTATAAGCCAGCT

Secondary structure and sequence

TSD TIR

5'

3'

AA G G                   -A    A   GAAA   -- G      CTGA   G  GT
  T G CCTGTTCGCTTCAGCTTAT  AGCC GCT    AGT  T AAACGG    TTT TT  
  | | |||||||||||||||||||  |||| |||    |||  | ||||||    ||| ||   
  A C GGACAAGCGAAGTCGAATA  TCGG CGA    TCG  G TTTGTC    AAA AG  
TA G G                   AG    C   ATAG   GT G      ATAA   G  AG

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2750054

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2750054