SE2710103

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3436
  • Setaria italica
  • SE2710103
  • Tc1/Mariner
  • St13
  • scaffold_1:30247219-30247323
  • TA
  • TACTCCCTCCTTTTCAAATATATGATGTTTAGGACAAGCTAATTAGTTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
          -    C  A                  A C           TT
TACTCCCTCC TTTT AA TATATGATGTTTAGGACA G TAATTAGTTCA  
|||||||||| |||| || |||||||||||||||||| | |||||||||||   
ATGAGGGAGG AAAA TT ATATACTACAAATCCTGT C ATTAATCAAGT  
          T    A  A                  C A           GT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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