SE2710106

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3439
  • Setaria italica
  • SE2710106
  • Tc1/Mariner
  • St3
  • scaffold_3:43256844-43256994
  • TA
  • TACTCCCTCCGTTCCAAATTGTAGGTTGTTTTGACTTTTCTATACGCATA

Secondary structure and sequence

TSD    TIR
5'



3' 
               A                 A        TAC     TATATTA           AACATAC
TACTCCCTCCGTTCC AATTGTAGGTTGTTTTG CTTTTCTA   GCATA       TTATGCATCTA       
||||||||||||||| ||||||||||||||||| ||||||||   |||||       |||||||||||       A
ATGAGGGAGGCAAGG TTAACATCCAGCAAAAC GAAAAGAT   CGTAT       GATACGTGGAT       
               C                 C        TTA     CAAAAAC           CTATAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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