SE2710148

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3481
  • Setaria italica
  • SE2710148
  • Tc1/Mariner
  • St17
  • scaffold_9:22908389-22908538
  • TA
  • TACTCCCTCCATCCCAAATTATAAGTCGCTTTGACTTTTTTGATACATTCACTTTGCTATGTATATAGATATA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                          A                     A        AC
TACTCCCTCCATCCCAAATTATAAGTCGCTTTGACTTTTTTG TACATTCACTTTGCTATGTAT TAGATATA  
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   
ATGAGGGAGGTAGGGTTTAATATTCAGCGAAACTGAAAAAAC ATGTAGGTGAAACGATACGTA ATCTGTAT  
                                          C                     G        AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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