SE2710155

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3488
  • Setaria italica
  • SE2710155
  • Tc1/Mariner
  • St3
  • scaffold_4:1328189-1328317
  • TA
  • TACTCCCTCCGTTCCAAATTGTAGATCGTTTTGGCTTTTCTAGCTAGATATAGTGTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                        A              CT  --- -       ---A      GTC
TACTCCCTCCGTTCCAAATTGTAG TCGTTTTGGCTTTT  AG   C TAGATAT    GTGTAT   
|||||||||||||||||||||||| ||||||||||||||  ||   | |||||||    ||||||    
ATGAGGGAGGCAAGGTTTAACATC AGCAAAATCGAAAA  TC   G ATCTATA    TACGTA   
                        C              AT  CAA T       ATAA      GAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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